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Repository revision

Revision: 1:ef4a081bc97b

Repository 'allegro'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/allegro

Allegro tool metadata

Miscellaneous

Name: Allegro

Description: Linkage and Haplotype analysis

Id: allegro

Guid: toolshed.g2.bx.psu.edu/repos/iuc/allegro/allegro/2.1

Version: 2.1

Version command string: allegro 2>&1 | head -1 | awk -F' ' '{print $2}'

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/allegro/allegro/2.1 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/allegro/allegro/2.0

allegro

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

allegro

2

package

Additional information about this tool

Command:

allegro $allegro_conf

Interpreter: None

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

inp_ped: pedin.21
inp_dat: datain.21
inp_map: map.21
cond_haplotypes|opt_haplotypes: yes

name: value

pedin.21
datain.21
map.21
value

Test-2

inp_ped: pedin.21
inp_dat: datain.21
inp_map: map.21

name: value

pedin.21
datain.21
map.21
value

Test-3

inp_ped: pedin.21
inp_dat: datain.21
inp_map: map.21

name: value

pedin.21
datain.21
map.21
value