Repository revision
5:9115b978ce10

Repository 'fastq_combiner'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner

Combine FASTA and QUAL tool metadata
Miscellaneous
into FASTQ
fastq_combiner
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.1.5+galaxy2
1.1.5+galaxy2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.1.5+galaxy2 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.1.5
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.1.1
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.0.1
fastq_combiner
Requirements (dependencies defined in the <requirements> tag set)
name version type
galaxy_sequence_utils 1.1.5 package
Additional information about this tool
gx-fastq-combiner '$fasta_file' '${fasta_file.extension}' '$qual_file' '${qual_file.extension}' '$output_file' $force_quality_encoding
    
None
False
Functional tests
name inputs outputs required files
Test-1 fasta_file: s2fq_phiX.csfasta
qual_file: s2fq_phiX.qualsolid
force_quality_encoding: None
name: value
s2fq_phiX.csfasta
s2fq_phiX.qualsolid
value
Test-2 fasta_file: s2fq_phiX.csfasta
qual_file: s2fq_phiX.qualsolid
force_quality_encoding: ascii
name: value
s2fq_phiX.csfasta
s2fq_phiX.qualsolid
value
Test-3 fasta_file: fastq_combiner_in_1.fasta
qual_file: fastq_combiner_in_1.qual454
force_quality_encoding: None
name: value
fastq_combiner_in_1.fasta
fastq_combiner_in_1.qual454
value
Test-4 fasta_file: fastq_combiner_in_1.fasta
qual_file: fastq_combiner_in_1.qual454
force_quality_encoding: decimal
name: value
fastq_combiner_in_1.fasta
fastq_combiner_in_1.qual454
value
Test-5 fasta_file: fastq_combiner_in_1.fasta
qual_file: None
force_quality_encoding: decimal
name: value
fastq_combiner_in_1.fasta
value
Test-6 fasta_file: s2fq_phiX.csfasta
qual_file: None
force_quality_encoding: ascii
name: value
s2fq_phiX.csfasta
value