Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.1.1 |
toolshed.g2.bx.psu.edu/repos/devteam/fastq_combiner/fastq_combiner/1.0.1 (this tool) |
fastq_combiner |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
galaxy_sequence_utils | 1.0.0 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
fasta_file: s2fq_phiX.csfasta qual_file: s2fq_phiX.qualsolid force_quality_encoding: None |
output_file: combine_phiX_out_1.fastqcssanger |
s2fq_phiX.csfasta s2fq_phiX.qualsolid combine_phiX_out_1.fastqcssanger |
Test-2 |
fasta_file: s2fq_phiX.csfasta qual_file: s2fq_phiX.qualsolid force_quality_encoding: ascii |
output_file: combine_phiX_out_2.fastqcssanger |
s2fq_phiX.csfasta s2fq_phiX.qualsolid combine_phiX_out_2.fastqcssanger |
Test-3 |
fasta_file: fastq_combiner_in_1.fasta qual_file: fastq_combiner_in_1.qual454 force_quality_encoding: None |
output_file: wrapping_as_sanger.fastqsanger |
fastq_combiner_in_1.fasta fastq_combiner_in_1.qual454 wrapping_as_sanger.fastqsanger |
Test-4 |
fasta_file: fastq_combiner_in_1.fasta qual_file: fastq_combiner_in_1.qual454 force_quality_encoding: decimal |
output_file: wrapping_as_sanger_decimal.fastqsanger |
fastq_combiner_in_1.fasta fastq_combiner_in_1.qual454 wrapping_as_sanger_decimal.fastqsanger |
Test-5 |
fasta_file: fastq_combiner_in_1.fasta qual_file: None force_quality_encoding: decimal |
output_file: fastq_combiner_no_qual_decimal_out_1.fastqsanger |
fastq_combiner_in_1.fasta fastq_combiner_no_qual_decimal_out_1.fastqsanger |
Test-6 |
fasta_file: s2fq_phiX.csfasta qual_file: None force_quality_encoding: ascii |
output_file: fastq_combiner_no_qual_ascii_out_1.fastqcssanger |
s2fq_phiX.csfasta fastq_combiner_no_qual_ascii_out_1.fastqcssanger |