| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/dropletutils_read_10x/dropletutils_read_10x/1.0.4+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/dropletutils_read_10x/dropletutils_read_10x/1.0.3+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/dropletutils_read_10x/dropletutils_read_10x/1.0.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/dropletutils_read_10x/dropletutils_read_10x/1.0.3+galaxy0 |
| dropletutils_read_10x |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| dropletutils-scripts | 0.0.5 | package |
| Additional information about this tool |
ln -s '${matrix}' matrix.mtx &&
ln -s '${genes}' genes.tsv &&
ln -s '${barcodes}' barcodes.tsv &&
dropletutils-read-10x-counts.R
-s .
-c TRUE
-o '${output_rds}'
#if $add_metadata.add_metadata_file
--metadata-files "${add_metadata.metadata_files}"
--cell-id-column "${add_metadata.cell_id_column}"
#end if
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
matrix: matrix.mtx genes: genes.tsv barcodes: barcodes.tsv |
name: value |
matrix.mtx genes.tsv barcodes.tsv value |