| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idposteriorerrorprobability/IDPosteriorErrorProbability/2.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idposteriorerrorprobability/IDPosteriorErrorProbability/2.5+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idposteriorerrorprobability/IDPosteriorErrorProbability/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idposteriorerrorprobability/IDPosteriorErrorProbability/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idposteriorerrorprobability/IDPosteriorErrorProbability/2.1.0 |
| IDPosteriorErrorProbability |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.5 | package |
| openms-thirdparty | 2.5 | package |
| blast | 2.9.0 | package |
| openjdk | 8.0.192 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: IDPosteriorErrorProbability_Mascot_input.idXML split_charge: False top_hits_only: False ignore_bad_data: False prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_Mascot_input.idXML value |
| Test-2 |
in: IDPosteriorErrorProbability_XTandem_input.idXML split_charge: False top_hits_only: False ignore_bad_data: False prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_XTandem_input.idXML value |
| Test-3 |
in: IDPosteriorErrorProbability_OMSSA_input.idXML split_charge: False top_hits_only: False ignore_bad_data: False prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_OMSSA_input.idXML value |
| Test-4 |
in: IDPosteriorErrorProbability_OMSSA_input2.idXML split_charge: True top_hits_only: False ignore_bad_data: False prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_OMSSA_input2.idXML value |
| Test-5 |
in: IDPosteriorErrorProbability_XTandem_input2.idXML split_charge: True top_hits_only: False ignore_bad_data: False prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_XTandem_input2.idXML value |
| Test-6 |
in: IDPosteriorErrorProbability_Mascot_input2.idXML split_charge: True top_hits_only: False ignore_bad_data: False prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_Mascot_input2.idXML value |
| Test-7 |
in: IDPosteriorErrorProbability_bad_data.idXML split_charge: False top_hits_only: False ignore_bad_data: True prob_correct: False fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_bad_data.idXML value |
| Test-8 |
in: IDPosteriorErrorProbability_OMSSA_input.idXML split_charge: False top_hits_only: False ignore_bad_data: False prob_correct: True fit_algorithm|number_of_bins: 100 fit_algorithm|incorrectly_assigned: Gumbel fit_algorithm|max_nr_iterations: 1000 fit_algorithm|neg_log_delta: 6 fit_algorithm|outlier_handling: ignore_iqr_outliers adv_opts_cond|fdr_for_targets_smaller: 0.05 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
IDPosteriorErrorProbability_OMSSA_input.idXML value |