| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/pjbriggs/ceas/ceas/1.0.2-4 |
| toolshed.g2.bx.psu.edu/repos/pjbriggs/ceas/ceas/1.0.2-3 (this tool) |
| toolshed.g2.bx.psu.edu/repos/pjbriggs/ceas/ceas/1.0.2-2 |
| ceas |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python_mysqldb | 1.2.5 | package |
| bx-python | 0.7.1 | package |
| cistrome_ceas | 1.0.2.d8c0751 | package |
| ucsc_fetchChromSizes | 1.0 | package |
| R | 3.1.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
bed_file: ceas_in.bed gdb_file: galGal3_test |
log_output: ceas_out1.log.re_match pdf_report: ceas_out1.pdf xls_output: ceas_out1.xls |
ceas_in.bed ceas_out1.log.re_match ceas_out1.pdf ceas_out1.xls |
| Test-2 |
bed_file: ceas_in.bed wig_file: ceas_in.wig gdb_file: galGal3_test |
log_output: ceas_out2.log.re_match pdf_report: ceas_out2.pdf xls_output: ceas_out2.xls |
ceas_in.bed ceas_in.wig ceas_out2.log.re_match ceas_out2.pdf ceas_out2.xls |
| Test-3 |
bed_file: ceas_in.bed wig_file: ceas_in.bigwig gdb_file: galGal3_test |
log_output: ceas_out3.log.re_match pdf_report: ceas_out3.pdf xls_output: ceas_out3.xls |
ceas_in.bed ceas_in.bigwig ceas_out3.log.re_match ceas_out3.pdf ceas_out3.xls |