| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmpress/1.1.5+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmpress/1.1.4+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmpress/1.1.2.0 |
| infernal_cmpress |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| infernal | 1.1.5 | package |
| coreutils | 9.5 | package |
| Additional information about this tool |
mkdir -p ./cm_model &&
#if str($cm_opts.cm_opts_selector) == "db":
ln -s '$cm_opts.database.fields.path' ./cm_model/
#else:
ln -s '$cmfile' ./cm_model/
#end if
&&
cmpress -F ./cm_model/* &&
cd ./cm_model/ &&
tar -cvf '$outfile' *.i1f *.i1i *.i1m *.i1p
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
cm_opts|cmfile: cmpress_input_minifam.cm cm_opts|cm_opts_selector: histdb |
cmpress_input_minifam.cm |
|
| Test-2 |
cm_opts|database: cmpress_input_minifam.cm cm_opts|cm_opts_selector: db |