Repository revision
8:c9e29ac5d099

Repository 'infernal'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/infernal

cmbuild tool metadata
Miscellaneous
cmbuild
Build covariance models from sequence alignments
infernal_cmbuild
toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmbuild/1.1.4+galaxy0
1.1.4+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmbuild/1.1.4+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmbuild/1.1.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmbuild/1.1.0.1
infernal_cmbuild
Requirements (dependencies defined in the <requirements> tag set)
name version type
infernal not provided package
infernal 1.1.4 package
coreutils 8.32 package
Functional tests
name inputs outputs required files
Test-1 alignment_infile: cmbuild_input_tRNA5.sto
Calibrate|L: 0.1
Calibrate|selector: True
name: value
cmbuild_input_tRNA5.sto
value
Test-2 alignment_infile: cmbuild_input_tRNA5.sto
effective_opts|emaxseq: 100
effective_opts|effective_opts_selector: --eent
Calibrate|L: 0.1
Calibrate|selector: True
name: value
cmbuild_input_tRNA5.sto
value