| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmpress/1.1.4+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmpress/1.1.2.0 |
| infernal_cmpress |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| infernal | not provided | package |
| infernal | 1.1.4 | package |
| coreutils | 8.32 | package |
| Additional information about this tool |
## CM file from the history or stored as database on disc
#if str($cm_opts.cm_opts_selector) == "db":
cmfile_path='$cm_opts.database.fields.path'
#else:
##'$cm_opts.cmfile'
cmfile_path='$cmfile'
#end if
&&
cmpress -F "\$cmfile_path" &&
##cmpress creates four files in the same directory of the cm file
cd `dirname "\$cmfile_path"` &&
tar -cvf '$outfile' `basename "\$cmfile_path"`.i1*
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
cm_opts|cmfile: cmpress_input_minifam.cm cm_opts|cm_opts_selector: histdb |
cmpress_input_minifam.cm |