| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.6.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.6.0+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.2.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.2.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.1.3+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.1.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.1.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.1.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/artic_minion/artic_minion/1.1.0_rc2+galaxy0 |
| artic_minion |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| artic | 1.6.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
read_file: test.fastq.gz primer_scheme_source|bed: primers.bed primer_scheme_source|primer_scheme_source_selector: history reference_source|reference: reference.fasta reference_source|reference_source_selector: history model_source|select_built_in: r941_prom_hac_g360+g422 model_source|source: built-in |
name: value name: value name: value |
test.fastq.gz primers.bed reference.fasta value |
| Test-2 |
read_file: test.fastq.gz primer_scheme_source|bed: test_bed primer_scheme_source|primer_scheme_source_selector: tool_data_table model_source|select_built_in: r941_prom_hac_g360+g422 model_source|source: built-in |
name: value name: value name: value |
test.fastq.gz value |
| Test-3 |
read_file: test.fastq.gz min_mapq: 20 min_depth: 10 align_consensus: True primer_scheme_source|bed: primers.bed primer_scheme_source|primer_scheme_source_selector: history reference_source|reference: reference.fasta reference_source|reference_source_selector: history model_source|select_built_in: r941_prom_hac_g360+g422 model_source|source: built-in |
name: value name: value name: value |
test.fastq.gz primers.bed reference.fasta value |
| Test-4 |
read_file: test.fastq.gz primer_scheme_source|bed: primers.bed primer_scheme_source|primer_scheme_source_selector: history reference_source|reference: reference.fasta reference_source|reference_source_selector: history model_source|model: r1041_e82_400bps_sup_v500 model_source|source: datatable |
test.fastq.gz primers.bed reference.fasta |