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Repository revision

Revision: 11:9e92447122a6

Repository 'scanpy_regress_variable'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable

Scanpy RegressOut tool metadata

Miscellaneous

Name: Scanpy RegressOut

Description: variables that might introduce batch effect

Id: scanpy_regress_variable

Guid: toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.3+galaxy10

Version: 1.4.3+galaxy10

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.6.0+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.3+galaxy10 (this tool)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.3+galaxy9

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.3+galaxy8

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.3+galaxy6

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.3+galaxy1

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.2+galaxy1

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_regress_variable/scanpy_regress_variable/1.4.2+galaxy0

scanpy_regress_variable

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

scanpy-scripts

0.2.10

package

Functional tests

name

inputs

outputs

required files

Test-1

input_obj_file: find_variable_genes.h5
output_format: anndata
variable_keys: n_counts
input_format: anndata

attributes: name

find_variable_genes.h5
name