Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/qiime_pick_open_reference_otus/qiime_pick_open_reference_otus/1.9.1.0 (this tool) |
qiime_pick_open_reference_otus |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
qiime | 1.9.1 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
ref_sequences|selector: history minimum_failure_threshold: 100000 suppress_align_and_tree: False otu_picking_method: uclust min_otu_size: 2 ref_sequences|reference_fp: pick_open_reference_otus/gg_13_8_79_otus.fasta percent_subsample: 0.001 new_ref_set_id: New prefilter|use_prefilter: false input_fps: pick_open_reference_otus/sequences.fasta suppress_taxonomy_assignment: False suppress_step4: False parallel: True prefilter_percent_id: 0.0 |
attributes: name attributes: name attributes: name attributes: name attributes: name |
pick_open_reference_otus/sequences.fasta pick_open_reference_otus/gg_13_8_79_otus.fasta name |
Test-2 |
ref_sequences|selector: history minimum_failure_threshold: 100000 suppress_align_and_tree: True otu_picking_method: uclust min_otu_size: 3 ref_sequences|reference_fp: pick_open_reference_otus/gg_13_8_79_otus.fasta percent_subsample: 0.001 new_ref_set_id: New prefilter|use_prefilter: false input_fps: pick_open_reference_otus/sequences.fasta suppress_taxonomy_assignment: True suppress_step4: False parallel: True prefilter_percent_id: 0.0 |
attributes: name attributes: name attributes: name attributes: name |
pick_open_reference_otus/sequences.fasta pick_open_reference_otus/gg_13_8_79_otus.fasta name |
Test-3 |
ref_sequences|selector: history minimum_failure_threshold: 100000 suppress_align_and_tree: False otu_picking_method: uclust min_otu_size: 10 ref_sequences|reference_fp: pick_open_reference_otus/gg_13_8_79_otus.fasta percent_subsample: 0.001 new_ref_set_id: New prefilter|use_prefilter: false input_fps: pick_open_reference_otus/sequences.fasta suppress_taxonomy_assignment: True suppress_step4: False parallel: True prefilter_percent_id: 0.0 |
attributes: name attributes: name attributes: name attributes: name attributes: name |
pick_open_reference_otus/sequences.fasta pick_open_reference_otus/gg_13_8_79_otus.fasta name |