Galaxy |

Repository revision

Revision: 6:2c763fb18010

Repository 'khmer_extract_partitions'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/khmer_extract_partitions

khmer: Extract partitions tool metadata

Miscellaneous

Name: khmer: Extract partitions

Description: Separate sequences that are annotated with partitions into grouped files

Id: khmer_extract_partitions

Guid: toolshed.g2.bx.psu.edu/repos/iuc/khmer_extract_partitions/khmer_extract_partitions/3.0.0a3+galaxy1

Version: 3.0.0a3+galaxy1

Version command string: extract-partitions.py --version 2>&1 | tail -n 1 | cut -d ' ' -f 2

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/khmer_extract_partitions/khmer_extract_partitions/3.0.0a3+galaxy2

toolshed.g2.bx.psu.edu/repos/iuc/khmer_extract_partitions/khmer_extract_partitions/3.0.0a3+galaxy1 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/khmer_extract_partitions/khmer_extract_partitions/3.0.0a1.0

toolshed.g2.bx.psu.edu/repos/iuc/khmer_extract_partitions/khmer_extract_partitions/2.0.0

khmer_extract_partitions

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

khmer

3.0.0a3

package

Functional tests

name

inputs

outputs

required files

Test-1

inputs: random-20-a.fa.part

random-20-a.fa.part