Repository revision
1:83ca801f21f9

Repository 'damidseq_polii_gene_call'
hg clone https://toolshed.g2.bx.psu.edu/repos/mvdbeek/damidseq_polii_gene_call

Calculate polII occupancy tool metadata
Miscellaneous
from DamIDseq data
damidseq_polII_gene_call
toolshed.g2.bx.psu.edu/repos/mvdbeek/damidseq_polii_gene_call/damidseq_polII_gene_call/1.0.2
1.0.2
Rscript '$__tool_directory__/polii.gene.call' | grep -o "v.*"
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/mvdbeek/damidseq_polii_gene_call/damidseq_polII_gene_call/1.0.2 (this tool)
damidseq_polII_gene_call
Requirements (dependencies defined in the <requirements> tag set)
name version type
r-base 3.5 package
Functional tests
name inputs outputs required files
Test-1 genes: genes.gff
fdr: 1
iter: 500
input_file: polII.bed
attributes: name
attributes: name
polII.bed
genes.gff
name