Repository revision
6:22bb32eae6a1

Repository 'points2labelimage'
hg clone https://toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage

Convert coordinates to label map tool metadata
Miscellaneous
ip_points_to_label
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.5.0
0.5.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.5.0 (this tool)
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.4.1+galaxy1
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.4.1+galaxy0
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.4+galaxy0
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.3-2
toolshed.g2.bx.psu.edu/repos/imgteam/points2labelimage/ip_points_to_label/0.3
ip_points_to_label
Requirements (dependencies defined in the <requirements> tag set)
name version type
scikit-image 0.25.2 package
numpy 2.3.4 package
pandas 2.3.3 package
tifffile 2025.10.16 package
giatools 0.3.1 package
Additional information about this tool
python '$__tool_directory__/points2label.py'
        '$input.file_ext'
        '$input'
        '$output'
        $shapex
        $shapey
        $has_header
        $swap_xy
        $binary

    
None
False
Functional tests
name inputs outputs required files
Test-1 input: input1.tsv
shapex: 30
shapey: 20
has_header: False
swap_xy: True
binary: True
name: value
input1.tsv
value
Test-2 input: input2.tsv
shapex: 205
shapey: 84
has_header: True
swap_xy: False
binary: True
name: value
input2.tsv
value
Test-3 input: input2.tsv
shapex: 205
shapey: 84
has_header: True
swap_xy: False
binary: False
name: value
input2.tsv
value
Test-4 input: input3.tsv
shapex: 200
shapey: 100
has_header: True
swap_xy: False
binary: True
name: value
input3.tsv
value
Test-5 input: input3.tsv
shapex: 200
shapey: 100
has_header: True
swap_xy: False
binary: False
name: value
input3.tsv
value
Test-6 input: input4.tsv
shapex: 200
shapey: 100
has_header: True
swap_xy: False
binary: False
name: value
input4.tsv
value
Test-7 input: input5.tsv
shapex: 200
shapey: 100
has_header: True
swap_xy: False
binary: False
name: value
input5.tsv
value
Test-8 input: input6.tsv
shapex: 200
shapey: 100
has_header: True
swap_xy: False
binary: False
input6.tsv
Test-9 input: rois.geojson
shapex: 300
shapey: 300
has_header: False
swap_xy: False
binary: False
name: value
rois.geojson
value
Test-10 input: rois.geojson
shapex: 300
shapey: 300
has_header: False
swap_xy: True
binary: False
name: value
rois.geojson
value
Test-11 input: rois-noname.geojson
shapex: 300
shapey: 300
has_header: False
swap_xy: False
binary: False
name: value
rois-noname.geojson
value
Test-12 input: rois-illegal2.geojson
shapex: 300
shapey: 300
has_header: False
swap_xy: False
binary: False
rois-illegal2.geojson