Repository revision
7:72be09dfd803

Repository 'mothur_summary_single'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single

Summary.single tool metadata
Miscellaneous
Summary of calculator values for OTUs
mothur_summary_single
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.39.5.0
1.39.5.0
mothur "#help()" | sed '7q;d' | cut -d" " -f2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.39.5.2
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.39.5.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.36.1.0
mothur_summary_single
Requirements (dependencies defined in the <requirements> tag set)
name version type
mothur 1.39.5 package
Functional tests
name inputs outputs required files
Test-1 savelog: True
otu: amazon.an.shared
attributes: name
attributes: name
amazon.an.shared
name
Test-2 calc: ['ace', 'bootstrap', 'chao', 'jack', 'sobs', 'simpsoneven', 'shannoneven', 'heip', 'smithwilson', 'bergerparker', 'coverage', 'goodscoverage', 'simpson', 'invsimpson', 'qstat', 'shannon', 'npshannon', 'boneh', 'efron', 'shen', 'solow', 'logseries', 'geometric', 'bstick', 'nseqs']
savelog: True
otu: amazon.an.shared
label: ['0.05', '0.22', '0.32']
attributes: name
attributes: name
amazon.an.shared
name
Test-3 savelog: True
otu: amazon.an.shared
groupmode: False
attributes: name
amazon.an.shared
name
Test-4 subsample|use: yes
savelog: True
otu: amazon.an.rabund
subsample|iters: 42
subsample|subsample: 10
attributes: name
attributes: name
attributes: name
amazon.an.rabund
name