| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_fixmate/samtools_fixmate/1.13 |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_fixmate/samtools_fixmate/1.9 (this tool) |
| samtools_fixmate |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 1.9 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
bamfile: 2_isize_overflow.sam |
attributes: name |
2_isize_overflow.sam name |
| Test-2 |
bamfile: 3_reverse_read_pp_lt.sam |
attributes: name |
3_reverse_read_pp_lt.sam name |
| Test-3 |
bamfile: 4_reverse_read_pp_equal.sam |
attributes: name |
4_reverse_read_pp_equal.sam name |
| Test-4 |
tempcigar: True bamfile: 5_ct.sam |
attributes: name |
5_ct.sam name |
| Test-5 |
tempcigar: True bamfile: 6_ct_replace.sam |
attributes: name |
6_ct_replace.sam name |
| Test-6 |
bamfile: 7_two_read_mapped.sam |
attributes: name |
7_two_read_mapped.sam name |