Repository revision
5:2c9f2a24f7a4

Repository 'migmap'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/migmap

MiGMAP tool metadata
Miscellaneous
MiGMAP
mapper for full-length T- and B-cell repertoire sequencing
migmap
toolshed.g2.bx.psu.edu/repos/iuc/migmap/migmap/1.0.3+galaxy2
1.0.3+galaxy2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/migmap/migmap/1.0.3+galaxy2 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/migmap/migmap/1.0.3+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/migmap/migmap/1.0.3
toolshed.g2.bx.psu.edu/repos/iuc/migmap/migmap/1.0.2.2
toolshed.g2.bx.psu.edu/repos/iuc/migmap/migmap/1.0.2.1
migmap
Requirements (dependencies defined in the <requirements> tag set)
name version type
migmap 1.0.3 package
Functional tests
name inputs outputs required files
Test-1 input: test_stop_codon.fa
allow_incomplete: True
all_alleles: True
allow_no_cdr3: True
allow_noncanonical: True
allow_noncoding: True
by_read: True
name: value
test_stop_codon.fa
value
Test-2 input: test_stop_codon.fq.gz
allow_incomplete: True
all_alleles: True
allow_no_cdr3: True
allow_noncanonical: True
allow_noncoding: True
by_read: True
name: value
test_stop_codon.fq.gz
value
Test-3 input: test_out_of_frame.fa
allow_noncoding: True
by_read: True
name: value
test_out_of_frame.fa
value