| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/qiime_filter_samples_from_otu_table/qiime_filter_samples_from_otu_table/1.9.1.0 (this tool) |
| qiime_filter_samples_from_otu_table |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| qiime | 1.9.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
filtering|min_count: 150 filtering|type: abundance input_fp: filter_samples_from_otu_table/otu_table.biom |
attributes: name |
filter_samples_from_otu_table/otu_table.biom name |
| Test-2 |
filtering|min_count: 0 filtering|type: abundance input_fp: filter_samples_from_otu_table/otu_table.biom filtering|max_count: 149 |
attributes: name |
filter_samples_from_otu_table/otu_table.biom name |
| Test-3 |
filtering|output_mapping: True filtering|valid_states: Treatment:Control filtering|type: metadata input_fp: filter_samples_from_otu_table/otu_table.biom filtering|mapping_fp: filter_samples_from_otu_table/map.txt |
attributes: name attributes: name |
filter_samples_from_otu_table/otu_table.biom filter_samples_from_otu_table/map.txt name |
| Test-4 |
filtering|output_mapping: False filtering|valid_states: Treatment:*,!Control filtering|type: metadata input_fp: filter_samples_from_otu_table/otu_table.biom filtering|mapping_fp: filter_samples_from_otu_table/map.txt |
attributes: name |
filter_samples_from_otu_table/otu_table.biom filter_samples_from_otu_table/map.txt name |
| Test-5 |
filtering|sample_id_fp: filter_samples_from_otu_table/ids.txt filtering|type: id input_fp: filter_samples_from_otu_table/otu_table.biom filtering|negate_sample_id_fp: False |
attributes: name |
filter_samples_from_otu_table/otu_table.biom filter_samples_from_otu_table/ids.txt name |
| Test-6 |
filtering|sample_id_fp: filter_samples_from_otu_table/ids.txt filtering|type: id input_fp: filter_samples_from_otu_table/otu_table.biom filtering|negate_sample_id_fp: True |
attributes: name |
filter_samples_from_otu_table/otu_table.biom filter_samples_from_otu_table/ids.txt name |