| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/seurat/seurat/3.2.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/seurat/seurat/3.1.5+galaxy2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/seurat/seurat/3.1.5+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/seurat/seurat/3.1.5 |
| toolshed.g2.bx.psu.edu/repos/iuc/seurat/seurat/3.1.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/seurat/seurat/2.3.4 |
| seurat |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| r-seurat | 3.1.5 | package |
| r-rmarkdown | 2.2 | package |
| r-base | 3.6 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
meta|warn: False adv|resolution: 0.6 adv|high_thresholds: 20000000 adv|cells_use: 500 meta|varstate: False adv|logfc_threshold: 0.25 adv|min_cells: 3 meta|plots: feat adv|min_pct: 0.25 adv|min_genes: 200 adv|low_thresholds: 1 counts: counts.tab.gz meta|showcode: True |
attributes: name |
counts.tab.gz name |
| Test-2 |
meta|warn: False adv|resolution: 0.6 adv|high_thresholds: 20000000 adv|cells_use: 500 meta|varstate: False adv|logfc_threshold: 0.25 adv|min_cells: 3 meta|plots: feat adv|min_pct: 0.25 adv|min_genes: 200 adv|low_thresholds: 1 counts: counts.tab.gz meta|showcode: True adv|perplexity: 16 |
attributes: name |
counts.tab.gz name |