Repository revision
3:226287d75d96

Repository 'proteomics_moff'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff

moFF tool metadata
Miscellaneous
moFF
extracts MS1 intensities from spectrum files
proteomics_moff
toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff/proteomics_moff/1.2.1.2
1.2.1.2
echo 1.2.1
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff/proteomics_moff/2.0.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff/proteomics_moff/1.2.1.2 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff/proteomics_moff/1.2.1.1
toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff/proteomics_moff/1.2.1
toolshed.g2.bx.psu.edu/repos/galaxyp/proteomics_moff/proteomics_moff/1.2
proteomics_moff
Requirements (dependencies defined in the <requirements> tag set)
name version type
moff 1.2.1 package
Functional tests
name inputs outputs required files
Test-1 task|task_selector: all
task|msms_input|input_type_selector: mzml
task|ident_input|ident_input_file: list collection
task|msms_input|inputraw: list collection
task|peptide_summary: True
task|ident_input|input_type_selector: ps
attributes: name
input/mbr_test1.tabular
input/mbr_test2.tabular
input/mbr_test1.mzml
input/mbr_test2.mzml
name
Test-2 task|task_selector: moff
task|msms_input|input_type_selector: mzml
task|ident_input|ident_input_file: input/test.tabular
task|msms_input|inputraw: input/test.mzml
task|peptide_summary: True
task|ident_input|input_type_selector: ps
attributes: name
attributes: name
input/test.tabular
input/test.mzml
name
Test-3 task|task_selector: moff
task|msms_input|input_type_selector: mzml
task|ident_input|input_type_selector: generic
task|ident_input|prot: 2
task|ident_input|peptide: 3
task|ident_input|mz: 14
task|ident_input|ident_input_file: input/test.tabular
task|ident_input|rt: 13
task|msms_input|inputraw: input/test.mzml
task|peptide_summary: True
task|ident_input|mod_peptide: 7
task|ident_input|mass: 17
task|ident_input|remove_header: True
task|ident_input|charge: 15
attributes: name
attributes: name
input/test.tabular
input/test.mzml
name
Test-4 task|task_selector: all
task|msms_input|input_type_selector: mzml
task|ident_input|input_type_selector: generic
task|ident_input|prot: 2
task|ident_input|peptide: 3
task|ident_input|mz: 14
task|ident_input|ident_input_file: list collection
task|ident_input|rt: 13
task|msms_input|inputraw: list collection
task|peptide_summary: True
task|ident_input|mod_peptide: 7
task|ident_input|mass: 17
task|ident_input|remove_header: True
task|ident_input|charge: 15
attributes: name
input/mbr_test1.tabular
input/mbr_test2.tabular
input/mbr_test1.mzml
input/mbr_test2.mzml
name
Test-5 task|task_selector: mbr
task|ext: tabular
task|ident_input|ident_input_file: list collection
task|ident_input|input_type_selector: ps
input/mbr_test1.tabular
input/mbr_test2.tabular