Repository revision
0:d0ae18156aa2

Repository 'blastalign'
hg clone https://toolshed.g2.bx.psu.edu/repos/abims-sbr/blastalign

BlastAlign tool metadata
Miscellaneous
BlastAlign
Align the nucleic acid sequences using BLASTN
blastalign
toolshed.g2.bx.psu.edu/repos/abims-sbr/blastalign/blastalign/2.1
2.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/abims-sbr/blastalign/blastalign/2.1 (this tool)
blastalign
Requirements (dependencies defined in the <requirements> tag set)
name version type
python 2.7 package
blastalign 1.4 package
Functional tests
name inputs outputs required files
Test-1 advanced_option|x:
advanced_option|s: 0
advanced_option|r:
output_format: fasta
advanced_option|n: False
advanced_option|m: 95
input: inputs/locus1_sp2.fasta
attributes: name
inputs/locus1_sp2.fasta
name
Test-2 advanced_option|x:
advanced_option|s: 0
advanced_option|r:
output_format: phylip
advanced_option|n: False
advanced_option|m: 95
input: inputs/locus1_sp3.fasta
attributes: name
inputs/locus1_sp3.fasta
name
Test-3 advanced_option|x:
advanced_option|s: 0
advanced_option|r:
output_format: nexus
advanced_option|n: False
advanced_option|m: 95
input: inputs/locus3_sp2.fasta
attributes: name
inputs/locus3_sp2.fasta
name
Test-4 advanced_option|x:
advanced_option|s: 0
advanced_option|r:
output_format: fasta
advanced_option|n: False
advanced_option|m: 95
input: inputs/locus8_sp2.fasta
attributes: name
inputs/locus8_sp2.fasta
name