| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/gga/tripal_expression_get_biomaterials/expression_get_biomaterials/3.2.1.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/gga/tripal_expression_get_biomaterials/expression_get_biomaterials/3.2.0 |
| expression_get_biomaterials |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python-tripal | 3.2.1 | package |
| jq | 1.5 | package |
| Additional information about this tool |
if [ -z "\$TRIPAILLE_GLOBAL_CONFIG_PATH" ]; then
echo "__default: local" > '.auth.yml' &&
echo "local:" >> '.auth.yml' &&
echo " tripal_url: \"\$GALAXY_TRIPAL_URL\"" >> '.auth.yml' &&
echo " username: \"\$GALAXY_TRIPAL_USER\"" >> '.auth.yml' &&
echo " password: \"\$GALAXY_TRIPAL_PASSWORD\"" >> '.auth.yml' &&
export TRIPAILLE_GLOBAL_CONFIG_PATH='.auth.yml'
; fi &&
tripaille expression get_biomaterials
#if $provider_id:
--provider_id '$provider_id'
#end if
#if $biomaterial_id:
--biomaterial_id '$biomaterial_id'
#end if
#if $organism_id:
--organism_id '$organism_id'
#end if
#if $dbxref_id:
--dbxref_id '$dbxref_id'
#end if
| jq -S . > '$results'
| Functional tests |