Repository revision
13:a65296ffb4a0

Repository 'mafft'
hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/mafft

MAFFT tool metadata
Miscellaneous
MAFFT
Multiple alignment program for amino acid or nucleotide sequences
rbc_mafft
toolshed.g2.bx.psu.edu/repos/rnateam/mafft/rbc_mafft/7.508+galaxy0
7.508+galaxy0
mafft --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/rnateam/mafft/rbc_mafft/7.508+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/rnateam/mafft/rbc_mafft/7.221.1
rbc_mafft
Requirements (dependencies defined in the <requirements> tag set)
name version type
mafft 7.508 package
fasta3 36.3.8 package
Functional tests
name inputs outputs required files
Test-1 inputSequences: sample.fa
cond_flavour|flavourType: mafft-fftns
outputFormat:
name: value
sample.fa
value
Test-2 inputSequences: sample.fa
cond_flavour|flavourType: mafft-nwns
outputFormat: --clustalout
name: value
sample.fa
value
Test-3 inputSequences: sample.fa
cond_flavour|dist_flavour|weighti: 2.7
cond_flavour|dist_flavour|distance_method: --fastapair
cond_flavour|iterations: 1000
cond_flavour|flavourType: custom
outputFormat: --clustalout
name: value
sample.fa
value