| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/gtftobed12/gtftobed12/357 (this tool) |
| gtftobed12 |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| ucsc-gtftogenepred | 357 | package |
| ucsc-genepredtobed | 357 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
gtf_file: gtf2bed_test.gtf |
attributes: name |
gtf2bed_test.gtf name |
| Test-2 |
advanced_options|advanced_options_selector: advanced gtf_file: gtf2bed_test_missing_exon.gtf advanced_options|ignoreGroupsWithoutExons: True |
attributes: name |
gtf2bed_test_missing_exon.gtf name |
| Test-3 |
advanced_options|advanced_options_selector: advanced gtf_file: gtf2bed_test.gtf advanced_options|includeVersion: True |
attributes: name |
gtf2bed_test.gtf name |
| Test-4 |
advanced_options|advanced_options_selector: advanced gtf_file: gtf2bed_test.gtf advanced_options|infoOut: True |
attributes: name attributes: name |
gtf2bed_test.gtf name |
| Test-5 |
advanced_options|advanced_options_selector: advanced gtf_file: gtf2bed_test.gtf advanced_options|sourcePrefixes_0|sourcePrefix: hav |
attributes: name |
gtf2bed_test.gtf name |
| Test-6 |
advanced_options|advanced_options_selector: advanced gtf_file: gtf2bed_test.gtf advanced_options|sourcePrefixes_1|sourcePrefix: ens advanced_options|sourcePrefixes_0|sourcePrefix: hav |
attributes: name |
gtf2bed_test.gtf name |