Repository revision
71:d96f6c9a39e0

Repository 's_mart'
hg clone https://toolshed.g2.bx.psu.edu/repos/yufei-luo/s_mart

restrict from size tool metadata
Miscellaneous
restrict from size
Select the elements of a list of sequences or transcripts with a given size.
restrictFromSize
toolshed.g2.bx.psu.edu/repos/yufei-luo/s_mart/restrictFromSize/1.0.0
1.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/yufei-luo/s_mart/restrictFromSize/1.0.0 (this tool)
restrictFromSize
Requirements (dependencies defined in the <requirements> tag set)
name version type
PYTHONPATH not provided set_environment
Additional information about this tool
../Java/Python/restrictFromSize.py -i $formatType.inputFileName
		#if $formatType.FormatInputFileName == 'fasta':
			-f fasta
		#elif $formatType.FormatInputFileName == 'bed':
			-f bed
		#elif $formatType.FormatInputFileName == 'gff':
			-f gff
		#elif $formatType.FormatInputFileName == 'gff2':
			-f gff2
		#elif $formatType.FormatInputFileName == 'gff3':
			-f gff3
		#elif $formatType.FormatInputFileName == 'sam':
			-f sam
		#elif $formatType.FormatInputFileName == 'gtf':
			-f gtf
		#end if

		#if $OptionMax.maximum == "Yes":
			-M $OptionMax.max
		#end if		
		#if $OptionMin.minimum == "Yes":
			-m $OptionMin.min
		#end if	
				
		-o $outputFileGff
python
False
Functional tests
No functional tests defined