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Repository revision

Revision: 71:d96f6c9a39e0

Repository 's_mart'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/yufei-luo/s_mart

get letter distribution tool metadata

Miscellaneous

Name: get letter distribution

Description: Calculate distribution for each nucleotide per position for all short reads

Id: getLetterDistribution1

Guid: toolshed.g2.bx.psu.edu/repos/yufei-luo/s_mart/getLetterDistribution1/1.0.0

Version: 1.0.0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/yufei-luo/s_mart/getLetterDistribution1/1.0.0 (this tool)

getLetterDistribution1

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

PYTHONPATH

not provided

set_environment

Functional tests

name

inputs

outputs

required files

Test-1

formatType|inputFileName: short_fastq.fastq
formatType|FormatInputFileName: fastq

outputFileNameCSV: exp_getletterdistribution_short_fastq.csv

short_fastq.fastq
exp_getletterdistribution_short_fastq.csv