| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.1.5+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.1.2-p1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.1.2-p1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.1.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.0.9 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.0.7+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.0.7+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.0.7 |
| toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/0.1.2 |
| repeatmasker_wrapper |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| repeatmasker | 4.1.5 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_fasta: small.fasta repeat_source|repeat_lib: repeats.fasta repeat_source|source_type: library |
name: value name: value name: value name: value |
small.fasta repeats.fasta value |
| Test-2 |
input_fasta: small.fasta repeat_source|repeat_lib: repeats.fasta repeat_source|source_type: library gff: True advanced|keep_alignments: True advanced|poly: True |
name: value name: value name: value name: value name: value name: value name: value |
small.fasta repeats.fasta value |
| Test-3 |
input_fasta: small.fasta repeat_source|species_source|species_list: human repeat_source|source_type: dfam |
name: value name: value name: value name: value |
small.fasta value |
| Test-4 |
input_fasta: small.fasta repeat_source|dfam_lib: Dfam_partial_test.h5 repeat_source|species_name: rodent repeat_source|source_type: dfam_up |
name: value name: value name: value name: value |
small.fasta Dfam_partial_test.h5 value |
| Test-5 |
input_fasta: small.fasta repeat_source|species_source|species_list: rattus repeat_source|source_type: dfam |
name: value name: value name: value name: value |
small.fasta value |