Repository revision
10:1691af4a0d17

Repository 'funannotate_clean'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean

Funannotate assembly clean tool metadata
Miscellaneous
funannotate_clean
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.15+galaxy4
1.8.15+galaxy4
funannotate check --show-versions
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.15+galaxy4 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.15+galaxy3
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.15+galaxy2
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.15+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.15+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.9+galaxy3
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.9+galaxy2
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.9+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_clean/funannotate_clean/1.8.9+galaxy0
funannotate_clean
Requirements (dependencies defined in the <requirements> tag set)
name version type
funannotate 1.8.15 package
Additional information about this tool
funannotate clean
--input '${input}'
--out '${output}'
--pident ${pident}
--cov ${cov}
--minlen ${minlen}
${exhaustive}
--cpus \${GALAXY_SLOTS:-1}
    
None
False
Functional tests
name inputs outputs required files
Test-1 input: genome.fa
name: value
genome.fa
value
Test-2 input: genome.fa
pident: 100
cov: 100
name: value
genome.fa
value