| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.15.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.10 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.9+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.9 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.4.0.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.4.0.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.3.1.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.3.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/bcftools_concat/bcftools_concat/1.3.0 |
| bcftools_concat |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bcftools | 1.10 | package |
| htslib | 1.10 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_files: ['concat.1.b.vcf', 'concat.1.a.vcf'] output_type: v |
name: value |
concat.1.b.vcf concat.1.a.vcf value |
| Test-2 |
input_files: ['concat.1.b.vcf', 'concat.1.a.vcf'] sec_default|mode|naive: yes output_type: v |
name: value |
concat.1.b.vcf concat.1.a.vcf value |
| Test-3 |
input_files: ['concat.2.b.vcf', 'concat.2.a.vcf'] sec_default|mode|overlaps|allow_overlaps: yes output_type: v |
name: value |
concat.2.b.vcf concat.2.a.vcf value |
| Test-4 |
input_files: ['concat.2.b.vcf', 'concat.2.a.vcf'] sec_default|mode|overlaps|rm_dups: none sec_default|mode|overlaps|allow_overlaps: yes output_type: v |
name: value |
concat.2.b.vcf concat.2.a.vcf value |