Repository revision
6:2b3e65a4252f

Repository 'snpsift'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snpsift

SnpSift CaseControl tool metadata
Miscellaneous
Count samples are in 'case' and 'control' groups.
snpSift_caseControl
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_caseControl/4.3+t.galaxy0
4.3+t.galaxy0
SnpSift dbnsfp 2>&1|head -n 1
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_caseControl/4.3+t.galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_caseControl/4.3.0
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_caseControl/4.1.1
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_caseControl/4.1.0
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_caseControl/4.0.0
snpSift_caseControl
Requirements (dependencies defined in the <requirements> tag set)
name version type
snpsift 4.3.1t package
coreutils 8.25 package
perl 5.26 package
Functional tests
name inputs outputs required files
Test-1 ctrl|ctrl_src: caseString
input: test.private.01.vcf
ctrl|caseControlStr: --
attributes: name
test.private.01.vcf
name
Test-2 ctrl|ctrl_src: caseString
input: test.private.02.vcf
ctrl|caseControlStr: --
attributes: name
test.private.02.vcf
name
Test-3 ctrl|ctrl_src: caseString
input: test.private.02.vcf
ctrl|caseControlStr: -+
name:
attributes: name
test.private.02.vcf
name