| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_filter/4.3+t.galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_filter/4.0.0 |
| snpSift_filter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| snpsift | 4.3.1t | package |
| coreutils | 8.25 | package |
| perl | 5.26 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: test01.vcf expr: QUAL >= 50 filtering|mode: entries |
attributes: name |
test01.vcf name |
| Test-2 |
input: test01.vcf expr: (CHROM = '19') filtering|mode: entries |
attributes: name |
test01.vcf name |
| Test-3 |
input: test01.vcf expr: (POS >= 20175) & (POS <= 35549) filtering|mode: entries |
attributes: name |
test01.vcf name |
| Test-4 |
input: test01.vcf expr: ( DP >= 5 ) filtering|mode: entries |
attributes: name |
test01.vcf name |