Repository revision
2:ba62b6bab010

Repository 'ctk'
hg clone https://toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk

Filter tool metadata
Miscellaneous
Filter
data on any column using simple expressions
Filter1
toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/Filter1/1.1.0
1.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/Filter1/1.1.0 (this tool)
Filter1
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 input: 1.bed
header_lines: 0
cond: c1=='chr22'
out_file1: filter1_test1.bed
1.bed
filter1_test1.bed
Test-2 input: 7.bed
header_lines: 0
cond: c1=='chr1' and c3-c2>=2000 and c6=='+'
out_file1: filter1_test2.bed
7.bed
filter1_test2.bed
Test-3 input: filter1_in3.sam
header_lines: 0
cond: c3=='chr1' and c5>5
out_file1: filter1_test3.sam
filter1_in3.sam
filter1_test3.sam
Test-4 input: filter1_inbad.bed
header_lines: 0
cond: c1=='chr22'
out_file1: filter1_test4.bed
filter1_inbad.bed
filter1_test4.bed
Test-5 input: filter1_in5.tab
header_lines: 1
cond: c8>500
out_file1: filter1_test5.tab
filter1_in5.tab
filter1_test5.tab