| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/Interval_Maf_Merged_Fasta2/1.0.1 (this tool) |
| Interval_Maf_Merged_Fasta2 |
| Requirements (dependencies defined in the <requirements> tag set) |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
overwrite_with_gaps: True input1: 13.bed maf_source_type|maf_identifier: 17_WAY_MULTIZ_hg18 maf_source_type|species: ['hg18', 'mm8'] maf_source_type|maf_source: cached |
out_file1: interval_maf_to_merged_fasta_out3.fasta |
13.bed interval_maf_to_merged_fasta_out3.fasta |
| Test-2 |
overwrite_with_gaps: True input1: 1.bed maf_source_type|maf_identifier: 8_WAY_MULTIZ_hg17 maf_source_type|species: ['canFam1', 'hg17', 'mm5', 'panTro1', 'rn3'] maf_source_type|maf_source: cached |
out_file1: interval_maf_to_merged_fasta_out.dat |
1.bed interval_maf_to_merged_fasta_out.dat |
| Test-3 |
overwrite_with_gaps: True input1: 1.bed maf_source_type|maf_file: 5.maf maf_source_type|species: ['canFam1', 'hg17', 'mm5', 'panTro1', 'rn3'] maf_source_type|maf_source: user |
out_file1: interval_maf_to_merged_fasta_user_out.dat |
1.bed 5.maf interval_maf_to_merged_fasta_user_out.dat |