Repository revision
2:ba62b6bab010

Repository 'ctk'
hg clone https://toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk

MAF to FASTA tool metadata
Miscellaneous
MAF to FASTA
Converts a MAF formatted file to FASTA format
MAF_To_Fasta1
toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/MAF_To_Fasta1/1.0.1
1.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/MAF_To_Fasta1/1.0.1 (this tool)
MAF_To_Fasta1
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 fasta_target_type|fasta_type: concatenated
input1: 3.maf
fasta_target_type|species: canFam1
out_file1: cf_maf2fasta_concat.dat
3.maf
cf_maf2fasta_concat.dat
Test-2 fasta_target_type|complete_blocks: partial_allowed
fasta_target_type|fasta_type: multiple
input1: 4.maf
fasta_target_type|species: ['hg17', 'panTro1', 'rheMac2', 'rn3', 'mm7', 'canFam2', 'bosTau2', 'dasNov1']
out_file1: cf_maf2fasta_new.dat
4.maf
cf_maf2fasta_new.dat