Repository revision
2:ba62b6bab010

Repository 'ctk'
hg clone https://toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk

SFF converter tool metadata
Miscellaneous
Sff_extractor
toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/Sff_extractor/1.0.1
1.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/yqiancolumbia/ctk/Sff_extractor/1.0.1 (this tool)
Sff_extractor
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 input: 2.sff
clip:
fastq_output: False
out_file2: sff_converter_xml_1.dat
out_file3: sff_converter_fasta.dat
out_file4: sff_converter_qual.dat
2.sff
sff_converter_xml_1.dat
sff_converter_fasta.dat
sff_converter_qual.dat
Test-2 input: 2.sff
clip:
fastq_output: True
out_file1: sff_converter_fastq.dat
out_file2: sff_converter_xml_2.dat
2.sff
sff_converter_fastq.dat
sff_converter_xml_2.dat