Repository revision
81:a446ab055307

Repository 'bam_readtagger'
hg clone https://toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger

Tag alignment files tool metadata
Miscellaneous
from multiple bam files
bam_readtagger
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.25
0.5.25
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.25 (this tool)
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.24
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.23
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.22
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.21
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.20
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.19
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.18
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.17
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.16
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.15
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.14
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.13
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.12
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.11
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.10
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.9
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.8
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.7
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.6
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.5
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.4
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.3
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.2
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.1
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.5.0
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.4.19
toolshed.g2.bx.psu.edu/repos/mvdbeek/bam_readtagger/bam_readtagger/0.1.8
bam_readtagger
Requirements (dependencies defined in the <requirements> tag set)
name version type
readtagger 0.5.25 package
Functional tests
name inputs outputs required files
Test-1 verified: True
alignment_series_0|annotate_with: pasteurianus.bam
alignment_series_0|m_tag: B
discarded: True
tag_file: dm6.bam
alignment_series_0|r_tag: A
attributes: name
attributes: name
attributes: name
dm6.bam
pasteurianus.bam
name
Test-2 verified: True
alignment_series_0|annotate_with: dm6.bam
alignment_series_0|m_tag: B
discarded: True
tag_file: pasteurianus.bam
alignment_series_0|r_tag: A
attributes: name
attributes: name
attributes: name
pasteurianus.bam
dm6.bam
name
Test-3 verified: True
alignment_series_0|annotate_with: proper_pair_discard_fbti.bam
alignment_series_0|m_tag: B
discarded: True
tag_file: proper_pair_discard.bam
discard_proper_pairs: True
alignment_series_0|r_tag: A
attributes: name
attributes: name
attributes: name
proper_pair_discard.bam
proper_pair_discard_fbti.bam
name