| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.21142.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.20175.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.20163.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.11579.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.11392.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.10246.0 |
| idpquery |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bumbershoot | 3_0_21142_0e4f4a4 | package |
| Additional information about this tool |
#set $input_name = $input.display_name
#set $output_name = $input_name.split(".")[0] + ".tsv"
ln -s '$input' '${input_name}' &&
idpQuery $group_by.group_by_value $group_by.report_columns '${input_name}' &&
mv '$output_name' output
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: 201203-624176-12-mm-gui-test.idpDB group_by|report_columns: ['Accession', 'FilteredSpectra', 'Description'] group_by|group_by_value: Protein |
name: value |
201203-624176-12-mm-gui-test.idpDB value |
| Test-2 |
input: 201203-624176-12-mm-gui-test.idpDB group_by|report_columns: ['ProteinGroup', 'Accession', 'PercentCoverage'] group_by|group_by_value: ProteinGroup |
name: value |
201203-624176-12-mm-gui-test.idpDB value |
| Test-3 |
input: 201203-624176-12-mm-gui-test.idpDB group_by|report_columns: ['GeneId', 'Accession', 'DistinctPeptides'] group_by|group_by_value: Gene |
name: value |
201203-624176-12-mm-gui-test.idpDB value |
| Test-4 |
input: 201203-624176-12-mm-gui-test.idpDB group_by|report_columns: ['GeneGroup', 'GeneId', 'DistinctMatches'] group_by|group_by_value: GeneGroup |
name: value |
201203-624176-12-mm-gui-test.idpDB value |