Repository revision
6:6da05a8b5d8b

Repository 'idpquery'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery

idpQuery tool metadata
Miscellaneous
idpQuery
Creates text reports from idpDB files.
idpquery
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.20175.0
3.0.20175.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.21142.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.20175.0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.20163.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.11579.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.11392.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpquery/idpquery/3.0.10246.0
idpquery
Requirements (dependencies defined in the <requirements> tag set)
name version type
bumbershoot 3_0_20175_cbf82d0 package
Functional tests
name inputs outputs required files
Test-1 input: 201203-624176-12-mm-gui-test.idpDB
group_by|report_columns: ['Accession', 'FilteredSpectra', 'Description']
group_by|group_by_value: Protein
attributes: name
201203-624176-12-mm-gui-test.idpDB
name
Test-2 input: 201203-624176-12-mm-gui-test.idpDB
group_by|report_columns: ['ProteinGroup', 'Accession', 'PercentCoverage']
group_by|group_by_value: ProteinGroup
attributes: name
201203-624176-12-mm-gui-test.idpDB
name
Test-3 input: 201203-624176-12-mm-gui-test.idpDB
group_by|report_columns: ['GeneId', 'Accession', 'DistinctPeptides']
group_by|group_by_value: Gene
attributes: name
201203-624176-12-mm-gui-test.idpDB
name
Test-4 input: 201203-624176-12-mm-gui-test.idpDB
group_by|report_columns: ['GeneGroup', 'GeneId', 'DistinctMatches']
group_by|group_by_value: GeneGroup
attributes: name
201203-624176-12-mm-gui-test.idpDB
name