Galaxy |

Repository revision

Revision: 12:7249f6c19612

Repository 'gecko'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bitlab/gecko

GECKO tool metadata

Miscellaneous

Name: GECKO

Description: A pairwise genome comparison software for the detection of High-scoring Segment Pairs

Id: GECKO

Guid: toolshed.g2.bx.psu.edu/repos/bitlab/gecko/GECKO/1.0.1

Version: 1.0.1

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/bitlab/gecko/GECKO/1.0.1 (this tool)

GECKO

Requirements (dependencies defined in the <requirements> tag set)

No requirements defined

Additional information about this tool

Command:

make all -C ${__tool_directory__}/src ; ${__tool_directory__}/bin/workflow.sh $genome1 $genome2 $length $similarity $wl 1 $frags_output0 $csv_output1

Interpreter: None

Forces a history refresh: False

Functional tests

No functional tests defined