Repository revision
11:4215810bb49d

Repository 'openms_idrtcalibration'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration

IDRTCalibration tool metadata
Miscellaneous
Can be used to calibrate RTs of peptide hits linearly to standards.
IDRTCalibration
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration/IDRTCalibration/2.5+galaxy0
2.5+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration/IDRTCalibration/2.6+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration/IDRTCalibration/2.5+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration/IDRTCalibration/2.3.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration/IDRTCalibration/2.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idrtcalibration/IDRTCalibration/2.1.0
IDRTCalibration
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.5 package
openms-thirdparty 2.5 package
blast 2.9.0 package
openjdk 8.0.192 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in: IDRTCalibration_1_input.idXML
calibrant_1_reference: 0.1
calibrant_2_reference: 0.9
calibrant_1_input: 10.0
calibrant_2_input: 90.0
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
IDRTCalibration_1_input.idXML
value
Test-2 in: degenerated_empty.idXML
calibrant_1_reference: 0.1
calibrant_2_reference: 0.9
calibrant_1_input: 10.0
calibrant_2_input: 90.0
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
degenerated_empty.idXML
value