Repository revision
13:4204882495f2

Repository 'openms_idscoreswitcher'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher

IDScoreSwitcher tool metadata
Miscellaneous
Switches between different scores of peptide or protein hits in identification data
IDScoreSwitcher
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.8+galaxy0
2.8+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/3.1+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.8+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.6+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.5+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.3.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idscoreswitcher/IDScoreSwitcher/2.1.0
IDScoreSwitcher
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.8 package
openms-thirdparty 2.8 package
omssa 2.1.9 package
blast 2.13.0 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in: IDFileConverter_12_output.idXML
proteins: False
new_score: Percolator_PEP
new_score_orientation: lower_better
new_score_type: Posterior Error Probability
old_score: Percolator_qvalue
adv_opts|force: False
adv_opts|test: true
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
IDFileConverter_12_output.idXML
value
Test-2 in: IDScoreSwitcher_2_input.idXML
proteins: True
new_score: Posterior Probability_score
new_score_orientation: higher_better
new_score_type: Posterior Probability
old_score:
adv_opts|force: False
adv_opts|test: true
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
IDScoreSwitcher_2_input.idXML
value