| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/homer_annotatepeaks/homer_annotatePeaks/4.11+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/homer_annotatepeaks/homer_annotatePeaks/4.11+galaxy0 (this tool) |
| homer_annotatePeaks |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| homer | 4.11 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: CTCF_peaks.bed CpG|bool: false gtf_file: small_simplified.gtf ann_file: annotations_default_simplified.txt |
name: value |
CTCF_peaks.bed small_simplified.gtf annotations_default_simplified.txt value |
| Test-2 |
input: CTCF_peaks.bed CpG|bool: false ann_file: annotations_default.txt |
name: value |
CTCF_peaks.bed annotations_default.txt value |
| Test-3 |
input: CTCF_peaks.bed CpG|bool: false gtf_file: small_simplified.gtf |
name: value |
CTCF_peaks.bed small_simplified.gtf value |
| Test-4 |
input: fake_phix_peaks.bed CpG|genome|fasta: phiX174.fasta CpG|genome|source: history CpG|bool: true |
name: value |
fake_phix_peaks.bed phiX174.fasta value |
| Test-5 |
input: fake_phix_peaks.bed CpG|genome|all_fasta_source: phiX174 CpG|genome|source: installed CpG|bool: true |
name: value |
fake_phix_peaks.bed value |
| Test-6 |
input: fake_phix_peaks.bed CpG|bool: false |
name: value |
fake_phix_peaks.bed value |