Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/trinity_ctat/ctat_discasm/ctat_discasm/1.0.0 (this tool) |
ctat_discasm |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
discasm | 0.1.3 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
left_input: DISCASM/SF2/reads_1.fq.gz chimeric: DISCASM/SF2/Chimeric.out.junction bam: DISCASM/SF2/Aligned.sortedByCoord.out.bam right_input: DISCASM/SF2/reads_2.fq.gz |
attributes: name |
DISCASM/SF2/Aligned.sortedByCoord.out.bam DISCASM/SF2/Chimeric.out.junction DISCASM/SF2/reads_1.fq.gz DISCASM/SF2/reads_2.fq.gz name |
Test-2 |
left_input: DISCASM/SF1/reads.left.simPE.fq chimeric: DISCASM/SF1/SF_out_chimeric.junction bam: DISCASM/SF1/SF_out_aligned.bam right_input: DISCASM/SF1/reads.right.simPE.fq |
attributes: name |
DISCASM/SF1/SF_out_aligned.bam DISCASM/SF1/SF_out_chimeric.junction DISCASM/SF1/reads.left.simPE.fq DISCASM/SF1/reads.right.simPE.fq name |