| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/0.2.3+galaxy3 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/0.2.3+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/0.2.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/0.2.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/3.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/3.0.2.1 |
| raceid_trajectory |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| r-raceid | 0.2.3 | package |
| Additional information about this tool |
Rscript '$__tool_directory__/scripts/pseudotemporal.R' '$userconf' 2> '$outlog'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
inputrds: out_cluster_default.rdat |
name: value name: value |
out_cluster_default.rdat value |
| Test-2 |
inputrds: out_cluster_default.rdat projcell|knn: 3 projcell|cthr: 5 projcell|use|nmode: True projcell|use|fr: False projcell|use|def: no projback|pdishuf: 2000 projback|use|fast: False projback|use|rseed: 17000 projback|use|def: no comppval|pthr: 0.01 comppval|sensitive: False plotgraph|showcells: False plotgraph|scthr: 0 plotgraph|use|tp: 0.5 plotgraph|use|def: no compscore|nn: 1 compscore|scthr: 0 |
name: value name: value |
out_cluster_default.rdat value |
| Test-3 |
inputrds: out_cluster_default.rdat projcell|knn: 4 projcell|cthr: 4 projcell|use|nmode: False projcell|use|fr: True projcell|use|def: no projback|pdishuf: 1500 projback|use|fast: True projback|use|rseed: 1500 projback|use|def: no comppval|pthr: 0.05 comppval|sensitive: True plotgraph|showcells: True plotgraph|scthr: 0.5 plotgraph|use|tp: 0.25 plotgraph|use|def: no compscore|nn: 2 compscore|scthr: 0.5 |
name: value |
out_cluster_default.rdat value |