| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/3.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/raceid_trajectory/raceid_trajectory/3.0.2.1 (this tool) |
| raceid_trajectory |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| r-raceid | 0.1.1 | package |
| bioconductor-scran | 1.6.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
inputrds: out_cluster_default.rdat |
attributes: name attributes: name |
out_cluster_default.rdat name |
| Test-2 |
plotgraph|scthr: 0 comppval|pthr: 0.01 projcell|use|nmode: True compscore|scthr: 0 plotgraph|use|showtsne: True projback|use|fast: False projcell|cthr: 5 compscore|nn: 1 projcell|knn: 3 projback|use|rseed: 17000 projcell|use|def: no plotgraph|use|def: no inputrds: out_cluster_default.rdat plotgraph|use|tp: 0.5 projcell|use|fr: False projback|use|def: no comppval|sensitive: False plotgraph|showcells: False projback|pdishuf: 2000 |
attributes: name attributes: name |
out_cluster_default.rdat name |
| Test-3 |
plotgraph|scthr: 0.5 comppval|pthr: 0.05 projcell|use|nmode: False compscore|scthr: 0.5 plotgraph|use|showtsne: False projback|use|fast: True projcell|cthr: 4 compscore|nn: 2 projcell|knn: 4 projback|use|rseed: 1500 projcell|use|def: no plotgraph|use|def: no inputrds: out_cluster_default.rdat plotgraph|use|tp: 0.25 projcell|use|fr: True projback|use|def: no comppval|sensitive: True plotgraph|showcells: True projback|pdishuf: 1500 |
attributes: name |
out_cluster_default.rdat name |