| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/pjbriggs/rnachipintegrator/rnachipintegrator_canonical_genes/1.0.2.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/pjbriggs/rnachipintegrator/rnachipintegrator_canonical_genes/0.4.4-0 |
| rnachipintegrator_canonical_genes |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python_xlsxwriter | 0.8.4 | package |
| rnachipintegrator | 1.0.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
cutoff: 50000 peaks_in: mm9_summits.txt canonical_genes: mm9_test |
xlsx_out: mm9_summits.xlsx peaks_per_feature_out: mm9_summits_per_feature.out features_per_peak_out: mm9_features_per_summit.out |
mm9_summits.txt mm9_summits.xlsx mm9_summits_per_feature.out mm9_features_per_summit.out |
| Test-2 |
cutoff: 50000 peaks_in: mm9_peaks.txt canonical_genes: mm9_test |
xlsx_out: mm9_peaks1.xlsx peaks_per_feature_out: mm9_peaks_per_feature1.out features_per_peak_out: mm9_features_per_peak1.out |
mm9_peaks.txt mm9_peaks1.xlsx mm9_peaks_per_feature1.out mm9_features_per_peak1.out |
| Test-3 |
cutoff: 50000 output|summary: True output|pad_output: True output|compact_format: False peaks_in: mm9_peaks.txt canonical_genes: mm9_test |
xlsx_out: mm9_peaks3.xlsx peaks_per_feature_out: mm9_peaks_per_feature3.out features_per_peak_out: mm9_features_per_peak3.out peaks_per_feature_summary: mm9_peaks_per_feature3.summary features_per_peak_summary: mm9_features_per_peak3.summary |
mm9_peaks.txt mm9_peaks3.xlsx mm9_peaks_per_feature3.out mm9_features_per_peak3.out mm9_peaks_per_feature3.summary mm9_features_per_peak3.summary |