Repository revision
1:03627f24605f

Repository 'lofreq_call'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/lofreq_call

Call variants tool metadata
Miscellaneous
with LoFreq
lofreq_call
toolshed.g2.bx.psu.edu/repos/iuc/lofreq_call/lofreq_call/2.1.3.1+galaxy0
2.1.3.1+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/lofreq_call/lofreq_call/2.1.3.1+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/lofreq_call/lofreq_call/2.1.3.1+galaxy0 (this tool)
lofreq_call
Requirements (dependencies defined in the <requirements> tag set)
name version type
lofreq 2.1.3.1 package
Functional tests
name inputs outputs required files
Test-1 reads: lofreq-in1.bam
reference_source|ref: pBR322.fa
reference_source|ref_selector: history
attributes: name
lofreq-in1.bam
pBR322.fa
name
Test-2 reads: lofreq-in1.bam
filter_control|filter_type: set_all_off
reference_source|ref: pBR322.fa
reference_source|ref_selector: history
attributes: name
lofreq-in1.bam
pBR322.fa
name