| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/phyloseq_add_rank_names/phyloseq_add_rank_names/1.50.0+galaxy3 |
| toolshed.g2.bx.psu.edu/repos/iuc/phyloseq_add_rank_names/phyloseq_add_rank_names/1.50.0+galaxy2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/phyloseq_add_rank_names/phyloseq_add_rank_names/1.50.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/phyloseq_add_rank_names/phyloseq_add_rank_names/1.50.0+galaxy0 |
| phyloseq_add_rank_names |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bioconductor-phyloseq | 1.50.0 | package |
| r-optparse | 1.7.5 | package |
| r-tidyverse | 2.0.0 | package |
| Additional information about this tool |
Rscript '${__tool_directory__}/add_rank_names_to_phyloseq.R' --input '$input' --output '$output' --ranks '$ranks'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: output.phyloseq ranks: Kingdom,Phylum,Class,Order,Family,Genus |
name: value |
output.phyloseq value |