| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/qiime_beta_diversity/qiime_beta_diversity/1.9.1.0 (this tool) |
| qiime_beta_diversity |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| qiime | 1.9.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
metrics: ['unweighted_unifrac', 'weighted_unifrac'] tree_path: beta_diversity/rep_set.tre input_path: beta_diversity/otu_table.biom full_tree: False |
beta_diversity/otu_table.biom beta_diversity/rep_set.tre |
|
| Test-2 |
metrics: ['abund_jaccard', 'binary_chisq', 'binary_chord', 'binary_euclidean', 'binary_hamming', 'binary_jaccard', 'binary_lennon', 'binary_ochiai', 'binary_pearson', 'binary_sorensen_dice', 'bray_curtis', 'canberra', 'chisq', 'chord', 'euclidean', 'gower', 'hellinger', 'kulczynski', 'manhattan', 'morisita_horn', 'pearson', 'soergel', 'spearman_approx', 'specprof', 'unifrac_g', 'unifrac_g_full_tree', 'unweighted_unifrac', 'unweighted_unifrac_full_tree', 'weighted_normalized_unifrac', 'weighted_unifrac'] tree_path: beta_diversity/rep_set.tre input_path: beta_diversity/otu_table.biom full_tree: False |
beta_diversity/otu_table.biom beta_diversity/rep_set.tre |